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Why? The purpose of these sessions are to train researchers to leverage the Genomics England clinical and genomic data, to assist them in their analysis, and also foster an environment where users from different backgrounds, skill sets, fields and coding abilities can set up collaborations and help each other across GECIP domains and Discovery Forum companies.

Who? These sessions will be accessible to all users eligible to access the Research Environment / Genomics England dataset - including both Discovery Forum and GECIP members.

When? We are aiming to arrange training sessions on a bimonthly basis. Please see the schedule below.

What? You can find material from previous training sessions and 'bioinformatics clinics' below. What comes next depends on you, so don't hesitate to reach out to us with suggestions on what to cover in upcoming sessions.

Where? All training sessions will be held online via Zoom and recordings of the session will be made available afterwards with all sensitive data removed.

Check this page regularly for updates on the next training session and course material for previous sessions. Also, do not hesitate to get in touch to recommend a topic for upcoming sessions. You can reach us by e-mailing [email protected]

Research Environment Training Sessions Schedule

DateTopicRegistration/Video Link
15/03/2022Introduction to the Research Environment

 

24/05/2022

Building a cohort based on phenotypes

Register: https://us02web.zoom.us/webinar/register/WN_e7noB2YTQO23lzi4jokx5Q
22/07/2022

Finding participants based on genotypes

Register: https://us02web.zoom.us/webinar/register/WN_4KeHChqoT5awjgeOi0H4Zg
20/09/2022Getting medical history for participantsRegister: https://us02web.zoom.us/webinar/register/WN_Wsh8q-rXSmCpr9KWZNE-ng
22/11/2022Using the HPC to run jobsRegister: https://us02web.zoom.us/webinar/register/WN_FDbE4ulJQN6TUEDaQjKt4w

Course content from previous Bioinformatics Clinics 2019

ClinicTopicContent
#1Genomics England High Performance Compute Cluster (HPC) Session 1

#1Genomics England High Performance Compute Cluster (HPC) Session 2

#2Genomics England Research Environment Clinical Data

#3Genomics England HPC and New Tools Overview

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